Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1353
Parameters: 2 7 7 80 10 50 1000
Length:  44790

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1440--1500
21
3.0
21
87
2
88
32
32
3
31
1.74
1904--1966
21
3.0
21
88
2
90
30
3
33
33
1.74
2410--2472
21
3.0
21
88
2
81
33
31
4
30
1.78
5770--5832
33
1.9
33
84
12
85
12
26
6
53
1.62
5847--5965
6
19.2
6
68
14
55
7
18
2
71
1.21
5830--5885
21
2.7
21
72
5
51
8
17
1
71
1.21
5829--5923
27
3.5
27
69
20
81
9
17
3
69
1.29
5829--5885
14
4.1
14
75
16
57
8
17
1
71
1.19
6953--7040
14
6.2
13
68
17
50
9
14
4
71
1.27
6977--7040
30
2.1
30
83
11
78
4
15
4
75
1.14
7020--7071
14
3.6
13
78
16
50
15
9
1
73
1.18
10170--10232
21
3.0
21
88
2
90
30
3
33
33
1.74
11665--11691
12
2.2
12
100
0
54
77
7
0
14
0.97
11684--11746
11
5.4
11
75
18
56
79
1
14
4
0.97
12054--12116
21
3.0
21
81
11
74
28
3
33
34
1.73
12054--12116
10
5.9
11
73
10
51
28
3
33
34
1.73
14444--14549
48
2.2
48
81
9
128
60
1
23
14
1.44
24025--24055
4
7.8
4
92
0
53
22
3
0
74
0.96
29040--29096
20
2.8
20
78
2
60
28
33
12
26
1.92
34699--35286
40
14.7
40
94
0
1005
30
20
26
22
1.98
42437--43011
40
14.7
40
90
4
906
30
20
27
22
1.98

Tables:   1

The End!