Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1510
Parameters: 2 7 7 80 10 50 1000
Length:  45002

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3672--3782
51
2.1
52
88
3
170
35
13
24
27
1.93
3730--3935
37
5.3
43
84
13
167
36
15
22
25
1.93
3751--3934
37
5.0
37
92
3
293
35
16
22
25
1.94
3751--3934
73
2.5
73
91
2
298
35
16
22
25
1.94
5192--5383
49
3.9
49
91
2
296
23
14
30
31
1.94
5199--5383
97
1.9
98
91
3
302
23
14
30
31
1.94
8523--8622
52
1.9
52
87
0
146
36
14
22
28
1.92
8596--8742
37
4.0
37
92
1
235
36
15
22
25
1.93
11583--11634
27
1.9
27
96
0
95
11
50
21
17
1.77
12526--12560
15
2.4
15
85
4
54
45
54
0
0
0.99
12530--12560
5
6.2
5
96
0
53
41
58
0
0
0.98
12942--12973
3
10.7
3
93
0
55
37
34
28
0
1.57
12973--13006
9
4.0
8
85
14
50
73
0
26
0
0.83
17058--17109
20
2.6
20
82
8
61
32
1
1
63
1.16
19537--19675
23
6.1
23
71
14
108
33
14
25
26
1.94
19559--19689
46
2.9
46
74
3
122
34
15
25
25
1.95
19550--19691
23
6.2
23
71
14
89
33
14
26
26
1.94
30651--30689
18
2.2
17
86
13
53
33
0
20
46
1.51
30794--30822
8
3.6
8
100
0
58
24
13
27
34
1.93
30909--30984
23
3.3
23
96
0
143
21
21
26
31
1.98
37979--38017
18
2.2
17
86
13
53
33
0
20
46
1.51
38122--38150
8
3.6
8
100
0
58
24
13
27
34
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38237--38312
23
3.3
23
96
0
143
21
21
26
31
1.98

Tables:   1

The End!