Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3642
Parameters: 2 7 7 80 10 50 1000
Length:  29925

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4802--4979
27
6.6
27
83
3
196
26
14
29
29
1.95
4802--4979
54
3.3
55
84
4
236
26
14
29
29
1.95
7854--8041
82
2.3
82
84
6
247
20
27
16
36
1.94
7840--8041
41
4.9
40
79
4
215
20
26
17
35
1.94
8779--8814
15
2.4
15
90
0
54
11
22
38
27
1.88
16319--16396
32
2.5
31
89
2
111
32
25
16
25
1.96
16319--16400
31
2.6
32
90
1
121
30
28
17
24
1.97
18655--18839
40
4.6
39
82
4
194
24
23
27
24
2.00
18708--18862
79
2.0
79
83
7
199
25
21
27
25
2.00
21807--22379
45
12.6
47
87
8
678
33
9
28
28
1.88
22238--22312
21
3.4
21
64
25
55
36
13
26
24
1.92
21807--22379
229
2.5
229
82
10
699
33
9
28
28
1.88
24787--24861
38
2.0
38
86
5
107
30
18
26
24
1.98
24915--25269
39
9.1
39
90
4
518
25
21
28
25
1.99
24915--25269
79
4.5
79
90
4
522
25
21
28
25
1.99
27862--28397
47
11.6
47
93
3
790
33
9
30
27
1.88
27862--28397
230
2.3
231
87
6
778
33
9
30
27
1.88

Tables:   1

The End!