Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3639
Parameters: 2 7 7 80 10 50 1000
Length:  34944

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8791--8826
16
2.2
16
95
0
63
27
0
33
38
1.57
9058--9099
15
2.7
16
82
14
52
52
2
0
45
1.13
9067--9108
15
2.9
15
82
10
52
52
0
0
47
1.00
9196--9245
16
3.1
16
73
21
50
58
0
0
42
0.98
10380--10439
29
2.1
28
84
3
75
18
11
25
45
1.83
24097--24140
20
2.2
20
83
4
52
15
9
13
61
1.56
29948--29978
11
2.8
11
100
0
62
0
25
6
67
1.14
30224--30474
22
11.5
22
84
10
250
8
0
47
43
1.39
30129--30782
7
94.4
7
84
6
559
3
4
52
38
1.42
30776--30891
22
5.7
18
91
8
115
0
14
64
20
1.28
30449--31066
7
90.7
7
87
7
519
3
9
54
32
1.50
30852--31037
65
2.9
62
80
10
205
9
13
45
30
1.76
30942--31038
33
2.9
33
95
4
169
14
14
42
28
1.85
31041--31206
8
21.2
8
88
5
146
9
0
46
43
1.35
31036--31176
7
18.7
7
84
7
86
7
0
48
43
1.32
31097--31207
8
13.9
8
91
7
172
13
0
39
46
1.43
31097--31214
40
3.0
40
91
2
193
13
0
40
45
1.43
31202--31273
7
10.1
7
96
3
135
13
0
56
29
1.38
31278--34944
7
523.9
7
86
10
4673
42
42
1
13
1.53

Tables:   1

The End!