Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1827
Parameters: 2 7 7 80 10 50 1000
Length:  44996

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4726--4775
21
2.3
21
82
3
55
52
0
0
48
1.00
4736--4775
21
1.9
21
89
0
62
50
0
0
50
1.00
8171--8521
182
1.9
180
85
1
486
28
26
25
19
1.99
16157--16329
46
3.7
46
77
13
201
30
30
19
20
1.97
16165--16338
93
1.9
93
92
0
294
29
30
19
20
1.97
16162--16351
46
4.1
45
70
11
125
30
29
19
20
1.97
19347--19446
43
2.3
43
81
1
121
19
36
29
16
1.93
19423--20196
43
18.2
43
82
3
748
17
32
33
16
1.93
19423--20196
128
6.1
129
80
4
714
17
32
33
16
1.93
19328--20196
85
10.2
84
78
7
704
17
32
32
17
1.94
20060--20170
42
2.7
41
83
4
123
19
35
27
17
1.94
21166--21518
182
2.0
180
86
2
501
28
26
26
19
1.99
28630--29472
128
6.6
127
81
5
814
18
31
32
17
1.94
28630--29472
85
9.9
86
80
5
781
18
31
32
17
1.94
28630--29472
43
19.8
43
81
4
827
18
31
32
17
1.94
36204--36243
13
3.1
13
88
0
62
25
37
27
10
1.88
44524--44992
42
11.5
41
85
12
609
17
32
34
15
1.91
44524--44992
82
5.8
82
86
12
616
17
32
34
15
1.91

Tables:   1

The End!