Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3477
Parameters: 2 7 7 80 10 50 1000
Length:  31755

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7558--7595
19
2.0
19
89
0
58
28
34
23
13
1.92
7681--7965
42
6.7
41
73
9
189
20
34
27
17
1.95
7681--7899
84
2.6
83
86
7
316
19
35
27
17
1.94
15833--16005
43
4.0
41
79
7
177
19
37
28
14
1.91
15832--16007
86
2.0
86
83
6
223
18
38
28
14
1.90
15986--16238
85
3.0
85
76
5
222
19
32
31
16
1.94
15852--16445
43
14.0
42
72
5
246
19
32
30
17
1.94
16114--16308
85
2.3
85
82
3
232
19
33
30
16
1.94
16157--16345
42
4.5
42
75
6
139
19
33
30
16
1.94
16068--16435
127
2.9
127
80
2
389
18
32
30
19
1.95
16462--16523
24
2.6
24
84
0
88
17
35
37
9
1.83
20875--20899
13
1.9
13
100
0
50
16
28
32
24
1.96
20978--21308
42
7.8
42
75
8
271
21
34
26
17
1.96
24969--25027
23
2.6
22
82
10
75
44
20
3
32
1.68
30112--30170
23
2.6
22
82
10
75
44
20
3
32
1.68

Tables:   1

The End!