Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2162
Parameters: 2 7 7 80 10 50 1000
Length:  15768

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2665--2882
46
4.7
47
85
10
234
35
11
26
27
1.90
2665--2979
93
3.4
93
81
11
264
36
9
26
27
1.87
2772--3029
139
1.9
140
90
4
414
36
7
27
29
1.85
2770--3069
139
2.2
138
83
6
383
35
9
28
27
1.88
3175--3282
37
2.9
37
94
1
182
23
18
31
26
1.97
4543--4962
39
10.7
39
86
5
598
25
21
27
25
1.99
4543--4928
77
4.9
78
93
3
636
26
21
26
25
1.99
5304--5347
21
2.1
21
95
0
79
27
18
31
22
1.97
9029--9152
47
2.7
47
92
2
207
34
12
26
26
1.91
9072--9142
23
3.1
23
64
18
58
33
11
26
28
1.91
9122--9393
48
5.8
48
85
10
368
34
7
27
30
1.84
9077--9390
98
3.4
95
83
11
359
34
7
27
30
1.85
9540--9648
37
2.9
37
93
0
182
23
19
31
25
1.98
11941--12165
40
5.7
40
87
5
305
24
22
27
25
2.00
11941--12198
119
2.2
119
81
6
292
25
21
27
25
1.99

Tables:   1

The End!