Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3541
Parameters: 2 7 7 80 10 50 1000
Length:  23761

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--719
48
14.9
48
90
7
1106
34
6
27
31
1.82
28--719
277
2.5
281
90
6
1104
34
6
27
31
1.82
28--719
95
7.4
95
89
7
1059
34
6
27
31
1.82
861--962
37
2.8
37
95
1
179
23
19
32
24
1.98
2226--2532
40
7.7
40
94
0
524
22
22
28
26
1.99
3365--3396
11
2.9
11
100
0
64
28
6
18
46
1.73
4717--5011
147
2.0
148
97
0
565
35
9
19
35
1.84
6392--6442
26
2.0
26
96
0
93
29
35
23
11
1.90
6255--6516
104
2.6
102
91
4
422
29
30
20
18
1.97
6843--6906
30
2.2
29
81
10
76
29
28
6
35
1.82
6850--6906
30
1.9
30
85
3
80
29
24
7
38
1.82
11468--11630
40
4.1
39
79
9
100
25
28
22
24
1.99
11530--11710
80
2.3
80
83
9
219
27
27
20
23
1.99
11527--11710
40
4.6
40
81
7
196
28
27
20
23
1.99
19366--19528
40
4.1
39
79
9
100
25
28
22
24
1.99
19428--19608
80
2.3
80
83
9
219
27
27
20
23
1.99
19425--19608
40
4.6
40
81
7
196
28
27
20
23
1.99

Tables:   1

The End!