Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold816
Parameters: 2 7 7 80 10 50 1000
Length:  22098

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--22098
501
44.1
504
92
4
35553
35
15
13
35
1.86
2196--2239
20
2.3
19
88
11
63
43
2
6
47
1.42
2196--2239
19
2.2
20
84
11
56
43
2
6
47
1.42
4720--4762
20
2.2
20
88
8
63
46
0
6
46
1.30
5231--5274
19
2.3
19
88
11
63
45
2
4
47
1.35
7226--7269
20
2.3
19
88
11
63
43
2
6
47
1.42
7226--7269
19
2.2
20
84
11
56
43
2
6
47
1.42
9220--9262
19
2.3
19
88
8
61
44
2
6
46
1.43
9706--9749
20
2.3
19
88
11
63
45
0
6
47
1.29
9706--9749
19
2.2
20
84
11
56
45
0
6
47
1.29
10215--10258
20
2.3
19
88
11
63
43
2
6
47
1.42
10215--10258
19
2.2
20
84
11
56
43
2
6
47
1.42
11238--11281
20
2.3
19
88
11
63
43
2
6
47
1.42
11238--11281
19
2.2
20
84
11
56
43
2
6
47
1.42
11744--11786
20
2.2
20
88
8
63
46
0
6
46
1.30
12245--12287
20
2.2
20
88
8
63
46
0
6
46
1.30
13260--13293
16
2.1
16
88
0
50
44
0
5
50
1.26
14250--14293
19
2.2
20
84
11
56
47
0
4
47
1.22
15249--15290
20
2.3
19
88
12
61
45
0
7
47
1.30
18259--18301
19
2.3
19
88
8
61
44
2
6
46
1.43
19263--19305
20
2.2
20
88
8
63
46
0
6
46
1.30
21265--21307
19
2.3
19
88
8
61
44
2
6
46
1.43

Tables:   1

The End!