Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1774
Parameters: 2 7 7 80 10 50 1000
Length:  29927

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--87
24
3.7
24
83
7
106
37
22
4
34
1.75
76--149
22
3.5
21
75
18
73
28
28
6
36
1.82
212--723
23
22.7
23
70
15
261
37
22
7
32
1.82
669--734
23
3.0
23
78
14
68
34
18
7
39
1.79
787--1209
23
18.5
22
76
10
284
32
6
23
37
1.82
787--2090
46
28.8
46
71
10
674
32
7
23
37
1.82
1267--2090
23
36.0
23
72
9
414
32
7
22
37
1.82
1239--2070
229
3.6
228
89
2
1240
32
7
22
37
1.82
7063--7106
23
2.0
22
81
4
52
18
9
27
45
1.79
7100--10231
23
137.5
22
74
9
1881
32
7
24
36
1.82
7112--24700
46
384.5
46
75
10
7691
32
7
24
36
1.82
7095--24926
69
259.9
68
73
11
10428
32
7
24
36
1.82
10288--11153
23
38.0
23
75
12
558
33
7
23
36
1.82
11210--12892
23
74.0
23
75
12
987
31
7
24
36
1.82
12950--24927
23
524.0
23
73
14
3892
32
7
24
36
1.82
7133--24927
229
78.0
223
90
4
8154
32
7
24
36
1.82

Tables:   1

The End!