Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2687
Parameters: 2 7 7 80 10 50 1000
Length:  34538

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1539--1635
30
3.2
30
72
8
99
28
16
26
27
1.97
3795--3825
12
2.6
12
100
0
62
25
16
12
45
1.83
3873--3920
5
9.0
5
84
13
53
4
16
0
79
0.89
3875--3920
22
2.1
22
88
8
67
4
15
0
80
0.86
4782--4865
22
3.8
22
75
12
91
14
9
4
71
1.28
6529--6624
30
3.2
29
75
7
104
29
17
26
27
1.98
8541--8626
30
2.9
31
74
6
97
25
15
30
29
1.96
12333--12458
55
2.3
56
91
1
200
23
15
30
30
1.95
19695--19741
20
2.3
20
85
0
67
21
12
36
29
1.91
21412--21474
33
1.9
33
84
12
85
12
25
6
55
1.60
21491--21558
13
4.8
13
70
26
50
11
17
0
70
1.16
21489--21532
18
2.4
18
84
0
61
13
18
0
68
1.22
21492--21558
30
2.4
27
87
7
89
11
17
0
70
1.17
22606--22677
12
5.7
12
77
14
56
6
13
5
73
1.22
22647--22716
12
5.6
12
73
18
54
18
7
1
72
1.14
22668--22706
13
2.7
15
88
11
55
28
7
0
64
1.21
24213--24259
20
2.3
20
85
0
67
21
12
36
29
1.91
24427--24485
27
2.2
26
88
8
84
40
16
10
32
1.82
25583--25630
20
2.4
20
75
0
60
20
29
18
31
1.97
31881--31915
17
2.0
17
88
5
52
80
0
0
20
0.72
31882--31915
9
3.8
9
88
11
52
82
0
0
17
0.67
31178--32012
441
1.9
436
95
4
1504
40
14
14
30
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33283--33331
24
2.1
23
84
3
62
8
26
2
63
1.34

Tables:   1

The End!