Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1765
Parameters: 2 7 7 80 10 50 1000
Length:  45275

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6638--6770
12
11.5
12
66
26
58
57
1
3
38
1.23
6698--6769
22
3.4
21
76
20
69
62
1
1
34
1.13
7040--7086
20
2.5
19
89
6
69
59
0
2
38
1.09
7041--7105
29
2.3
27
77
12
78
64
0
3
32
1.09
8857--8907
19
2.6
19
72
25
52
19
19
11
49
1.79
12736--12769
18
1.9
17
88
5
50
26
11
11
50
1.73
12811--14661
918
2.0
925
86
5
2593
37
14
11
35
1.83
16966--17346
35
10.6
36
74
11
264
44
10
12
32
1.76
17034--17343
108
2.8
108
86
3
408
44
10
12
32
1.77
16928--17383
35
12.7
35
73
14
242
43
10
12
33
1.76
16918--17384
18
25.9
18
70
17
208
43
10
12
33
1.76
17035--17384
108
3.2
105
81
8
348
42
10
12
34
1.77
17782--17834
25
2.1
26
92
3
90
1
30
45
22
1.63
18000--18105
6
16.8
6
83
11
70
1
22
1
73
1.03
18058--18111
3
18.0
3
90
7
83
1
29
0
68
1.00
18058--18118
18
3.3
19
86
4
81
1
32
0
65
1.02
18466--18526
28
2.1
30
84
6
81
39
8
18
34
1.80
18701--19679
77
12.7
78
82
5
1116
36
20
15
26
1.93
18719--19679
232
4.2
234
85
4
1197
37
20
15
26
1.93
20570--20608
5
7.6
5
88
5
51
0
0
12
87
0.55
20565--20610
10
4.5
10
81
5
56
0
2
10
86
0.64
29864--29932
37
1.9
36
82
5
86
40
7
8
43
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29903--30167
17
14.8
17
72
14
162
44
11
12
31
1.78
29903--30167
35
7.4
35
77
9
119
44
11
12
31
1.78
29876--30156
144
2.0
144
81
8
331
43
11
12
33
1.77
29903--30167
18
14.9
17
72
16
166
44
11
12
31
1.78
36034--36162
12
10.5
12
68
21
56
58
2
3
36
1.27
36048--36161
21
5.4
20
72
18
72
58
2
3
35
1.29
36042--36159
41
2.7
44
80
8
118
58
2
3
35
1.28
36439--36486
21
2.1
23
88
11
73
62
0
2
35
1.07
36425--36488
21
3.0
21
69
28
53
57
1
3
37
1.24
38277--38453
85
2.1
85
80
11
202
38
19
16
25
1.92
38365--38744
72
5.2
72
82
3
431
36
20
16
26
1.94
38395--38726
148
2.3
147
82
5
413
33
22
16
28
1.95
38744--38910
69
2.4
68
81
6
176
33
22
14
29
1.94
38619--38848
122
1.9
124
84
2
311
34
21
15
28
1.94
39717--39746
14
2.2
13
94
5
51
0
10
0
90
0.47
39717--39746
11
2.7
11
94
0
51
0
10
0
90
0.47

Tables:   1

The End!