Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3196
Parameters: 2 7 7 80 10 50 1000
Length:  24917

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2025--2316
42
6.9
42
80
9
319
17
28
34
19
1.95
2525--2603
24
3.3
24
85
5
106
6
37
35
20
1.78
2621--3757
43
27.2
43
76
9
801
16
31
34
18
1.92
2608--3618
85
12.0
86
83
3
1003
16
32
33
18
1.93
2621--3648
256
4.1
253
84
5
1056
16
32
33
17
1.93
2679--3618
299
3.2
299
87
4
1209
16
32
32
18
1.93
3547--3625
35
2.3
33
89
8
122
7
35
36
20
1.81
11313--11406
48
2.0
48
87
8
138
19
12
27
40
1.88
13829--13922
48
2.0
48
87
8
138
19
12
27
40
1.88
14789--15080
42
6.9
42
78
9
292
18
28
33
19
1.95
15288--15366
24
3.3
24
85
5
106
6
37
35
20
1.78
15371--16517
85
13.5
86
82
3
1100
16
31
34
17
1.92
15442--16504
299
3.6
299
86
4
1278
16
31
34
17
1.93
15371--16540
128
9.2
126
78
7
1023
15
31
34
17
1.92
15371--16517
43
26.9
43
79
5
1100
16
31
34
17
1.92
24462--24730
42
6.4
42
78
9
183
18
29
33
18
1.95
24440--24730
84
3.5
82
79
7
318
17
28
33
19
1.95

Tables:   1

The End!