Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold353
Parameters: 2 7 7 80 10 50 1000
Length:  11407

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
611--702
41
2.2
41
83
9
107
22
33
27
16
1.95
794--2513
42
41.1
41
69
14
642
21
34
25
18
1.96
824--4662
85
46.3
81
69
15
1129
21
34
26
18
1.96
794--2433
84
19.6
84
72
11
829
21
34
25
18
1.96
1937--4095
127
17.4
127
69
13
311
21
34
26
18
1.96
2694--4656
42
47.3
42
68
16
557
21
34
26
18
1.96
2561--3337
84
9.4
83
71
12
304
21
33
26
19
1.97
3070--3221
79
1.9
81
81
8
186
20
33
26
19
1.97
3366--4656
43
30.7
42
73
10
899
21
34
26
17
1.96
621--4662
209
19.4
209
70
14
1453
21
34
26
18
1.96
3383--4665
84
15.3
82
74
10
783
20
34
26
17
1.96
5418--11383
42
141.3
41
74
9
3982
21
35
25
17
1.95
5418--11383
85
70.6
84
74
8
3810
21
35
25
17
1.95
5418--11383
127
47.1
125
76
7
4515
21
35
25
17
1.95
9602--10063
240
1.9
240
81
0
548
23
34
25
17
1.96
10607--10738
70
1.9
70
85
0
183
24
34
26
15
1.95
10563--10782
113
1.9
113
83
3
282
24
33
25
16
1.96
10436--10912
240
2.0
240
82
1
580
22
33
26
17
1.96

Tables:   1

The End!