Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2415
Parameters: 2 7 7 80 10 50 1000
Length:  45847

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
792--996
27
7.6
27
85
4
252
26
15
28
29
1.96
8711--8915
27
7.6
27
85
4
252
26
15
28
29
1.96
13837--13882
20
2.2
20
84
7
56
21
6
19
52
1.69
17437--17484
15
3.3
15
73
5
53
29
0
27
43
1.55
17431--17474
14
3.1
14
74
6
52
27
0
34
38
1.57
17431--17490
29
2.1
29
93
0
102
28
0
30
41
1.56
20371--20422
23
2.3
22
75
21
54
9
23
1
65
1.32
23962--24006
14
3.3
14
78
6
56
48
15
0
35
1.45
26461--26531
24
3.0
24
80
0
79
15
29
0
54
1.41
26482--26531
18
2.8
18
84
0
64
16
28
0
56
1.41
27829--27876
15
3.3
15
73
5
53
29
0
27
43
1.55
27823--27866
14
3.1
14
74
6
52
27
0
34
38
1.57
27823--27882
29
2.1
29
93
0
102
28
0
30
41
1.56
29558--29820
40
6.6
40
84
4
273
25
21
28
25
1.99
29559--29855
80
3.7
80
80
6
221
25
21
28
24
1.99
37171--37385
39
5.4
39
85
5
220
25
20
28
26
1.99
37204--37356
79
1.9
80
85
6
213
22
19
30
27
1.98
44646--44808
40
4.2
41
80
13
141
23
22
28
25
1.99
44677--44820
76
1.9
76
85
8
204
22
20
28
27
1.99
44646--44850
39
5.2
40
81
10
219
24
21
28
25
1.99

Tables:   1

The End!