Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3455
Parameters: 2 7 7 80 10 50 1000
Length:  28348

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--709
47
10.5
46
91
3
724
33
8
29
28
1.87
214--709
94
5.2
95
93
2
813
33
8
29
28
1.87
2921--3190
40
6.8
40
92
0
414
23
22
28
24
1.99
6597--6758
80
2.0
79
81
8
186
26
20
25
26
1.99
6593--6735
40
3.6
40
82
9
175
24
21
27
25
1.99
6960--7464
47
10.6
47
92
2
794
33
8
29
29
1.86
6960--7464
96
5.3
96
93
2
838
33
8
29
29
1.86
13879--13949
26
2.8
26
85
4
83
28
18
25
28
1.98
17902--18076
40
4.4
40
87
4
232
25
22
26
25
2.00
18303--18346
22
2.0
21
83
16
54
31
18
13
36
1.90
25072--25288
40
5.4
40
87
2
278
24
21
26
27
1.99
25515--25558
22
2.0
21
83
16
54
31
18
13
36
1.90

Tables:   1

The End!