Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold327
Parameters: 2 7 7 80 10 50 1000
Length:  41712

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--113
26
2.0
27
88
3
79
28
34
25
11
1.91
7399--7549
71
2.1
71
92
2
250
30
29
17
23
1.97
8881--8977
30
3.2
30
72
2
88
27
14
27
29
1.95
9146--9213
27
2.5
27
82
0
82
44
14
19
22
1.86
9618--9704
34
2.6
32
80
7
93
24
21
26
27
1.99
9607--9717
33
3.3
33
75
9
109
27
21
23
27
1.99
13292--13390
27
3.7
27
86
8
130
28
14
16
41
1.87
13711--13754
18
2.4
18
88
7
63
18
15
15
50
1.79
14730--14801
37
1.9
37
94
0
126
27
30
19
22
1.98
14950--15131
48
3.8
48
88
4
267
30
26
6
36
1.81
14950--15130
98
1.9
97
88
4
276
30
26
6
37
1.81
15101--15341
47
5.1
47
91
0
374
26
28
11
33
1.91
15194--15269
22
3.3
22
67
22
66
25
28
13
32
1.93
15216--15342
25
5.3
25
62
17
72
29
27
10
33
1.90
25802--25975
93
1.9
93
93
0
303
27
29
21
21
1.99
25794--25969
46
3.8
46
80
10
205
28
28
21
21
1.98
28348--28397
15
3.4
15
86
2
66
60
12
18
10
1.59
28359--28406
15
3.2
15
79
5
53
56
14
16
12
1.68
31310--31481
93
1.8
93
94
0
308
27
30
21
20
1.98
31302--31477
46
3.8
46
81
10
214
28
29
21
21
1.98
35465--35589
46
2.7
46
91
1
198
21
20
27
31
1.98
35811--35848
19
2.0
20
85
15
53
36
0
23
39
1.55

Tables:   1

The End!