Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1019
Parameters: 2 7 7 80 10 50 1000
Length:  24396

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
594--633
1
40.0
1
94
0
71
2
0
97
0
0.17
3542--3804
40
6.6
40
87
3
316
24
20
28
26
1.99
3581--3839
80
3.3
80
84
3
238
25
20
28
25
1.99
10225--10487
40
6.6
40
87
3
316
24
20
28
26
1.99
10264--10522
80
3.3
80
84
3
238
25
20
28
25
1.99
12065--12244
90
2.0
90
96
0
333
28
8
20
42
1.81
15460--15543
44
1.9
44
85
4
116
39
11
23
25
1.89
15735--16147
55
7.6
54
82
6
496
34
17
25
21
1.96
15744--16147
108
3.7
108
95
0
700
34
18
25
21
1.96
15735--16162
53
7.9
53
82
6
484
35
17
25
22
1.95
20231--20413
40
4.6
40
81
8
187
24
20
27
27
1.99
20231--20410
79
2.3
81
83
8
219
23
21
27
27
1.99
20311--20460
39
3.8
39
81
7
117
24
22
28
24
1.99
20284--20450
79
2.1
79
82
4
194
24
20
28
26
1.99

Tables:   1

The End!