Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3059
Parameters: 2 7 7 80 10 50 1000
Length:  38581

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6900--7077
27
6.6
27
79
3
115
28
28
16
26
1.97
6900--7077
54
3.3
55
80
10
204
28
28
16
26
1.97
6921--7076
82
1.9
81
85
3
215
28
28
16
26
1.97
10008--10427
47
9.0
47
89
1
619
32
12
29
25
1.92
10007--10435
140
3.1
138
91
3
669
32
12
29
25
1.92
10588--10696
37
2.9
37
91
0
173
23
19
31
25
1.98
14379--14408
12
2.5
12
94
0
51
6
43
23
26
1.78
14826--14872
24
1.9
24
83
12
60
46
25
2
25
1.64
24506--24608
29
3.6
28
79
8
118
24
31
14
30
1.95
24508--24620
58
2.0
57
85
5
156
25
29
13
31
1.93
24506--24625
29
4.2
29
78
6
102
26
28
12
32
1.93
24703--24739
19
1.9
19
88
0
56
18
35
13
32
1.90
24834--24870
16
2.4
15
86
8
56
13
18
13
54
1.71
27703--27852
7
22.0
7
67
19
59
34
3
2
59
1.28
27704--27748
16
2.8
16
83
13
56
37
0
2
60
1.09
27704--27881
10
17.8
10
65
25
65
34
3
2
59
1.28
27782--27879
23
4.3
23
69
16
69
34
4
1
60
1.23
27633--27843
18
11.4
19
66
21
51
31
3
2
62
1.25
27855--27894
19
2.1
19
85
0
53
37
7
0
55
1.29

Tables:   1

The End!