Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3563
Parameters: 2 7 7 80 10 50 1000
Length:  38712

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6112--6251
50
2.8
50
94
0
244
37
15
21
26
1.92
6105--6282
50
3.5
51
89
3
227
38
14
21
25
1.91
6264--6412
31
4.8
31
89
3
210
28
18
27
25
1.98
6430--6585
47
3.3
46
82
4
150
29
14
25
30
1.95
6573--6727
42
3.7
42
83
3
204
30
13
25
30
1.94
6573--6729
84
1.9
84
91
0
260
30
13
26
29
1.94
8843--9067
114
2.0
114
99
0
441
28
19
12
39
1.87
10742--10966
114
2.0
114
99
0
441
28
19
12
39
1.87
12642--12866
114
2.0
114
99
0
441
28
19
12
39
1.87
14543--14767
114
2.0
114
99
0
441
28
19
12
39
1.87
16443--16667
114
2.0
114
99
0
441
28
19
12
39
1.87
18345--18569
114
2.0
114
99
0
441
28
19
12
39
1.87
27547--27758
79
2.7
80
81
8
254
25
20
27
26
1.99
27547--27754
40
5.2
40
83
7
253
24
21
27
26
1.99
35682--35873
40
4.8
40
83
7
223
23
22
28
25
1.99
35682--35899
79
2.7
79
82
8
248
24
22
27
25
1.99

Tables:   1

The End!