Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold719
Parameters: 2 7 7 80 10 50 1000
Length:  25748

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1775--1816
20
2.2
20
88
12
63
47
7
0
45
1.30
2784--2827
20
2.2
20
88
11
65
47
6
2
43
1.42
3292--3334
20
2.2
20
92
8
72
48
6
0
44
1.29
1--20593
505
40.9
507
91
4
33104
35
13
15
35
1.87
4300--4342
20
2.2
20
88
8
63
46
6
2
44
1.43
5296--5337
19
2.3
19
91
4
68
47
7
0
45
1.30
6288--6329
19
2.3
19
84
8
61
50
7
0
42
1.30
7284--7327
20
2.2
20
88
11
65
47
6
2
43
1.42
7775--7816
19
2.3
19
84
12
52
45
7
0
47
1.30
10281--10322
19
2.3
19
84
12
52
45
7
0
47
1.30
10771--10812
20
2.3
19
88
12
61
50
4
0
45
1.23
14301--14344
20
2.2
20
88
11
65
47
6
2
43
1.42
15317--15360
20
2.2
20
92
4
72
47
6
0
45
1.29
15830--15873
20
2.2
20
88
11
65
47
6
2
43
1.42
16849--16892
20
2.2
20
88
11
65
47
6
2
43
1.42
17871--17914
20
2.2
20
88
11
65
47
6
2
43
1.42
18890--18933
20
2.2
20
88
11
65
47
6
2
43
1.42
19405--19448
20
2.2
20
88
11
65
47
6
2
43
1.42
20167--20984
427
1.9
425
94
1
1433
35
11
15
37
1.84
21355--21398
20
2.2
20
88
11
65
47
6
2
43
1.42
22375--22418
20
2.2
20
88
11
65
47
6
2
43
1.42
23395--23438
20
2.2
20
88
11
65
47
6
2
43
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23907--23949
19
2.3
19
88
8
61
46
6
0
46
1.30
24905--24946
19
2.3
19
84
16
61
50
4
0
45
1.23
20594--25748
506
10.2
510
91
3
8302
35
13
15
35
1.87

Tables:   1

The End!