Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1690
Parameters: 2 7 7 80 10 50 1000
Length:  26861

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1510--2645
43
27.1
43
75
12
780
18
33
31
16
1.93
1571--1648
33
2.3
34
84
8
106
16
39
29
14
1.88
1608--2638
85
12.2
85
81
4
803
17
33
32
16
1.93
1640--2650
128
8.0
127
77
7
939
17
32
32
16
1.93
1640--2641
213
4.7
213
79
7
893
17
33
32
16
1.93
2655--2733
24
3.3
24
85
5
106
20
35
37
6
1.78
2940--3229
42
6.9
42
79
9
299
19
33
28
17
1.95
7060--7091
14
2.3
14
100
0
64
6
15
46
31
1.71
10581--10612
14
2.3
14
100
0
64
6
15
46
31
1.71
15252--15344
42
2.2
43
90
3
143
19
39
27
12
1.88
15332--15392
30
2.0
30
90
0
95
19
40
27
11
1.86
15362--16401
43
24.6
42
77
8
858
18
33
32
16
1.93
15384--15462
34
2.3
34
93
2
131
18
37
35
7
1.80
15470--16388
85
10.8
84
82
5
736
17
33
32
16
1.93
15362--16262
256
3.6
254
85
4
1085
17
33
32
16
1.93
15596--16330
299
2.5
298
92
2
1190
17
32
32
16
1.93
16406--16484
24
3.3
24
85
5
106
20
35
37
6
1.78
16694--16985
42
6.9
42
80
8
301
19
33
28
18
1.95
16730--16968
126
1.9
126
86
5
338
19
33
28
17
1.95
20776--20869
48
2.0
48
83
8
120
23
12
23
40
1.89
23309--23402
48
2.0
48
85
8
129
24
12
22
40
1.89
23432--23739
153
2.0
154
98
1
593
20
31
22
25
1.98

Tables:   1

The End!