Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1608
Parameters: 2 7 7 80 10 50 1000
Length:  62395

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3260--3431
80
2.2
79
80
7
179
26
20
26
26
1.99
3256--3398
40
3.6
40
80
9
166
24
20
27
26
1.99
3623--4264
47
13.6
47
94
1
1104
32
8
29
29
1.87
3623--4264
190
3.4
188
94
1
1104
32
8
29
29
1.87
3623--4253
237
2.7
237
95
0
1127
32
8
29
29
1.87
10976--11057
43
1.9
43
89
0
128
28
26
20
24
1.99
31299--31481
79
2.3
81
82
7
214
24
27
23
24
2.00
31278--31481
40
5.1
40
80
8
220
24
27
23
25
2.00
43987--44131
40
3.6
40
85
4
193
25
24
26
23
2.00
49413--49585
46
3.7
46
79
10
199
21
20
27
30
1.98
49410--49580
93
1.8
93
92
0
288
21
20
28
29
1.98
49811--49848
19
2.0
20
85
15
53
36
0
23
39
1.55

Tables:   1

The End!