Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3450
Parameters: 2 7 7 80 10 50 1000
Length:  47941

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3783--4039
42
6.2
43
75
12
171
19
37
28
14
1.92
3783--4039
83
3.1
80
79
10
234
19
37
28
14
1.92
3818--4533
42
17.2
43
83
7
718
17
33
32
16
1.93
5208--5328
58
2.1
59
88
1
181
24
19
23
33
1.97
13179--14369
85
14.1
85
84
5
1323
18
33
32
15
1.92
13179--14327
42
27.2
43
86
4
1368
17
33
32
15
1.92
14527--14575
25
1.9
26
91
4
82
26
12
48
12
1.75
15063--15176
58
1.9
59
89
1
176
25
16
21
35
1.94
25313--25349
12
2.9
13
85
14
51
21
8
0
70
1.13
25317--25349
13
2.5
13
95
5
57
15
6
0
78
0.93
31043--31864
43
19.7
43
87
5
1065
17
33
33
15
1.91
31043--31864
82
9.8
85
88
5
1066
17
33
33
15
1.91
34925--35101
42
4.2
43
77
8
182
18
38
28
14
1.90
35073--35861
211
3.7
213
87
4
1098
16
32
34
16
1.91
34961--35861
43
21.2
43
86
4
1127
17
33
33
16
1.92
36136--36214
24
3.3
25
78
8
83
21
35
35
7
1.82
36614--36729
58
2.0
58
93
0
196
24
18
23
33
1.97
40185--40256
35
2.1
35
86
0
99
36
11
26
26
1.90
45781--45876
49
2.0
49
93
0
165
23
16
28
31
1.96

Tables:   1

The End!