Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1595
Parameters: 2 7 7 80 10 50 1000
Length:  48582

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
454--523
36
1.9
36
85
5
97
27
24
21
27
1.99
9063--9136
29
2.6
29
86
4
96
25
31
16
27
1.96
17199--17272
29
2.6
29
86
4
96
25
31
16
27
1.96
31592--31651
27
2.3
26
85
2
75
35
16
25
23
1.95
32392--32483
27
3.4
27
87
3
132
26
20
19
33
1.96
38195--38254
27
2.3
26
85
2
75
35
20
23
21
1.96
38222--38363
67
2.1
67
88
5
203
30
22
28
18
1.97
38293--38344
27
2.0
26
84
3
68
34
21
26
17
1.95
38990--39072
25
3.4
25
77
8
89
24
19
18
38
1.93
43761--44640
98
8.9
98
89
4
1253
36
6
25
31
1.81
43761--44640
150
6.0
148
89
4
1234
36
6
25
31
1.81
43761--44640
248
3.6
248
95
2
1553
36
6
25
31
1.81
44790--44898
37
2.9
37
94
0
182
23
19
30
26
1.98

Tables:   1

The End!