Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2810
Parameters: 2 7 7 80 10 50 1000
Length:  42402

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11929--12145
40
5.5
40
87
3
298
23
22
28
25
1.99
11925--12135
79
2.7
80
86
5
288
24
21
27
26
1.99
25210--25279
24
3.0
24
67
29
60
31
14
32
21
1.93
25040--25425
47
8.2
47
90
0
583
34
11
28
26
1.90
25439--25619
46
4.0
46
89
1
267
35
8
30
24
1.85
27113--27508
40
9.9
40
89
0
549
23
19
29
26
1.99
27672--27724
25
2.1
25
82
6
63
35
13
30
20
1.91
31460--31838
47
8.1
47
90
0
535
34
10
29
25
1.90
31630--31699
24
3.0
24
67
29
60
31
14
32
21
1.93
31721--31795
22
3.3
22
67
29
66
34
10
29
25
1.90
31812--31930
46
2.6
46
93
0
202
33
10
31
24
1.88
39788--39813
11
2.4
11
100
0
52
46
19
7
26
1.77

Tables:   1

The End!