Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3034
Parameters: 2 7 7 80 10 50 1000
Length:  27269

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2207--2337
40
3.3
40
88
2
192
23
19
27
29
1.99
2235--2384
40
3.8
38
80
10
131
25
22
28
24
1.99
4346--4375
15
2.0
15
93
0
51
3
13
33
50
1.58
15189--15290
53
1.9
52
80
11
118
21
25
16
36
1.94
19458--20000
47
11.5
47
93
2
939
33
8
28
29
1.86
19458--20000
96
5.8
94
95
2
939
33
8
28
29
1.86
19458--20000
143
3.8
141
94
2
948
33
8
28
29
1.86
21570--21644
23
3.5
23
63
20
63
22
18
29
29
1.98
21404--21755
40
8.8
40
92
0
569
23
21
29
26
1.99
25764--26312
96
5.9
94
94
2
910
32
8
29
28
1.87
25764--26306
47
11.6
47
93
3
889
32
8
29
28
1.86

Tables:   1

The End!