Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2663
Parameters: 2 7 7 80 10 50 1000
Length:  18807

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--689
46
12.1
47
94
3
969
32
8
30
28
1.87
128--689
139
4.0
141
94
3
969
32
8
30
28
1.87
807--885
37
2.1
37
90
0
122
24
18
31
25
1.98
2783--2854
27
2.6
29
84
6
94
26
16
31
25
1.96
3170--3312
40
3.6
40
80
12
145
25
23
27
23
2.00
3290--3443
40
3.8
40
91
0
236
23
22
29
24
1.99
6889--7321
47
9.1
47
94
2
695
31
9
30
28
1.88
6889--7321
96
4.5
94
92
2
695
31
9
30
28
1.88
6889--7321
143
3.0
143
93
2
726
31
9
30
28
1.88
7440--7518
37
2.1
37
88
0
113
24
20
30
25
1.98
8989--9166
27
6.6
27
84
3
205
29
28
15
26
1.96
9010--9165
82
1.9
81
88
3
233
29
28
15
26
1.96
12627--12729
43
2.4
43
98
0
197
23
15
34
26
1.94
12711--12784
29
2.6
29
89
4
105
25
16
32
25
1.96
13097--13240
40
3.6
40
81
11
154
25
23
27
22
2.00
13215--13411
40
4.9
40
92
0
313
23
21
28
25
1.99
13177--13411
80
3.0
80
88
1
321
23
22
29
24
1.99
16855--17375
47
11.1
47
96
1
929
32
8
30
28
1.87
16918--16996
25
3.3
25
61
10
65
32
5
29
32
1.79
16855--17375
189
2.8
188
95
1
929
32
8
30
28
1.87
16855--17375
236
2.2
236
95
2
926
32
8
30
28
1.87
17493--17570
36
2.1
37
90
2
122
24
19
30
25
1.98

Tables:   1

The End!