Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold530
Parameters: 2 7 7 80 10 50 1000
Length:  26699

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239--415
85
2.1
84
97
1
336
37
8
27
25
1.85
1673--2212
47
11.6
47
90
5
771
32
8
29
28
1.87
1673--2212
93
5.8
94
90
6
771
32
8
29
28
1.87
1957--2090
45
3.2
37
65
30
90
31
10
31
26
1.90
4627--4701
38
2.0
38
86
5
107
30
18
26
24
1.98
4761--5149
39
9.9
40
91
2
599
25
21
27
25
2.00
4761--5149
79
4.9
79
91
3
586
25
21
27
25
2.00
4761--5149
118
3.3
118
93
1
618
25
21
27
25
2.00
6399--6577
85
2.1
85
98
0
349
37
8
27
26
1.85
7839--8496
47
13.6
47
83
10
742
33
8
29
28
1.87
7839--8496
96
6.8
94
82
12
696
33
8
29
28
1.87
7839--8496
143
4.5
143
85
9
843
33
8
29
28
1.87
8296--8332
16
2.3
16
100
0
74
32
10
32
24
1.90
8249--8379
63
2.1
63
100
0
262
30
10
32
26
1.90
8157--8469
155
2.0
156
96
2
576
32
10
30
26
1.90
8347--8468
22
5.3
22
62
21
61
33
11
29
25
1.91
8204--8426
110
2.0
108
93
1
374
32
11
30
25
1.91
8108--8475
202
1.8
204
90
4
600
32
10
30
26
1.90
11827--12003
49
3.7
48
76
13
152
29
19
28
23
1.98
11827--12003
99
1.8
94
85
8
248
29
19
28
23
1.98
14479--14644
46
3.6
45
76
12
158
24
27
21
27
1.99
17386--17505
51
2.4
51
91
0
195
28
21
20
29
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20116--20758
47
13.5
47
92
2
1043
33
8
27
30
1.86
20116--20758
96
6.7
94
92
2
998
33
8
27
30
1.86
22912--22981
36
1.9
37
82
8
90
31
17
25
25
1.97
23038--23253
39
5.6
39
88
7
316
25
21
27
25
1.99
23038--23253
79
2.8
78
89
6
325
25
21
27
25
1.99
23633--23682
25
1.9
25
84
8
64
30
8
32
30
1.86

Tables:   1

The End!