Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2737
Parameters: 2 7 7 80 10 50 1000
Length:  34934

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1640
602
2.7
601
95
2
2904
32
25
18
24
1.97
1--1640
302
5.5
300
94
2
2796
32
25
18
24
1.97
1411--1868
228
2.0
227
96
0
844
29
26
20
23
1.99
1109--2691
529
3.0
528
95
2
2875
31
25
19
24
1.98
1941--2397
228
2.0
227
93
1
790
29
25
20
24
1.99
2167--4483
301
7.7
302
97
2
4316
31
24
19
24
1.98
4267--4713
230
1.9
231
98
0
860
28
25
21
23
1.99
5024--9503
301
14.9
302
98
1
8499
32
24
19
24
1.98
5024--9503
603
7.4
605
98
1
8582
32
24
19
24
1.98
9765--13058
302
10.9
302
97
1
6207
32
24
19
24
1.98
9765--33552
604
39.0
605
82
9
16330
32
24
19
24
1.98
13317--14487
299
3.9
299
98
1
2217
32
24
19
24
1.98
13317--14487
599
2.0
599
97
1
2242
32
24
19
24
1.98
14740--16617
300
6.3
301
96
2
3411
32
24
19
23
1.97
16480--16763
146
2.0
136
91
6
451
39
21
18
20
1.92
16616--33552
302
56.1
302
92
4
17996
32
24
19
24
1.98
26805--27261
227
2.0
228
96
1
837
29
26
20
24
1.99
27334--27790
228
2.0
227
97
0
860
29
26
20
23
1.99
33544--34934
302
4.6
302
94
3
2437
32
24
18
24
1.97
33544--34934
603
2.3
601
95
2
2481
32
24
18
24
1.97

Tables:   1

The End!