genome.fa.s2309.2.7.7.80.10.50.1000.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2070
Parameters: 2 7 7 80 10 50 1000
Length:  22030

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
393--592	109	1.9	105	88	6	303	22	18	14	45	1.84
1742--1941	107	1.9	107	92	2	339	22	19	14	45	1.85
2451--2652	108	1.9	108	92	2	343	21	18	13	45	1.84
3160--3372	107	2.0	107	88	3	322	23	18	14	44	1.86
3871--4072	108	1.9	108	92	2	343	21	18	13	45	1.84
1079--19785	712	26.3	712	99	0	36705	36	12	11	39	1.80
4583--4784	108	1.9	108	92	2	343	21	18	13	45	1.84
5293--5494	108	1.9	108	92	2	343	21	18	13	45	1.84
6003--6204	108	1.9	108	92	2	343	21	18	13	45	1.84
6715--6927	107	2.0	107	88	3	322	23	18	13	44	1.85
7426--7627	108	1.9	108	92	2	343	21	18	13	45	1.84
8139--8340	108	1.9	108	92	2	343	21	18	13	45	1.84
8851--9052	108	1.9	108	92	2	343	21	18	13	45	1.84
9563--9764	108	1.9	108	92	2	343	21	18	13	45	1.84
10274--10475	108	1.9	108	92	2	343	21	18	13	45	1.84
10986--11198	107	2.0	107	89	1	329	23	18	14	44	1.86
11697--11898	108	1.9	108	92	2	343	21	18	13	45	1.84
12409--12621	107	2.0	107	88	3	322	23	18	13	44	1.85
14536--14737	108	1.9	108	92	2	343	21	18	13	45	1.84
15247--15448	108	1.9	108	91	2	334	22	18	13	45	1.84
19512--19710	107	1.9	106	86	5	285	22	18	13	45	1.84

Tables:   1

The End!