Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold335
Parameters: 2 7 7 80 10 50 1000
Length:  48935

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
690--936
91
2.7
90
85
9
310
39
19
16
24
1.92
867--1025
69
2.3
70
90
4
241
34
21
17
26
1.95
10989--11023
16
2.3
15
90
5
52
62
2
2
31
1.24
11137--11196
23
2.9
20
70
15
59
56
5
6
31
1.47
11150--11321
25
7.0
25
74
7
129
56
4
6
31
1.47
11341--11386
25
1.9
25
86
8
69
60
0
4
34
1.16
11867--11964
30
3.3
30
92
0
160
18
6
46
28
1.72
11902--11955
18
3.3
18
66
28
57
18
7
46
27
1.76
17358--17531
62
2.8
62
92
2
269
31
10
14
43
1.80
19838--19891
24
2.3
24
81
12
67
35
24
0
40
1.55
20977--21028
15
3.2
15
73
19
50
44
0
0
55
0.99
21109--21164
22
2.6
22
83
5
62
51
0
0
48
1.00
21143--21175
16
2.1
16
94
0
57
45
0
3
51
1.16
23399--23459
31
2.0
31
87
3
88
47
4
16
31
1.68
23968--24014
24
1.9
25
83
12
62
42
4
6
46
1.48
30284--30332
22
2.4
21
80
12
57
53
6
8
32
1.55
32308--32432
42
3.0
41
89
3
187
27
20
20
32
1.97
32960--33051
43
2.1
44
85
2
123
23
26
22
27
2.00
34518--34565
16
2.9
17
81
3
62
56
10
6
27
1.57
34512--34565
17
3.2
16
81
5
63
51
9
7
31
1.61
34635--34670
17
2.2
17
90
5
56
47
8
8
36
1.64
34805--34980
53
3.3
53
72
13
137
45
11
11
31
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34920--34968
17
2.8
17
87
3
71
48
12
12
26
1.75
34718--35014
18
16.8
17
69
14
122
43
11
13
32
1.79
34920--35051
34
3.9
32
74
16
90
40
12
12
34
1.81
34964--35018
16
3.3
16
82
9
74
36
10
10
41
1.75
34920--35050
32
3.8
33
77
12
106
41
12
12
33
1.81
35749--35779
14
2.2
14
94
0
53
0
19
3
77
0.90
35896--35964
20
3.2
21
76
19
72
2
20
0
76
0.91
35903--36012
22
5.1
20
73
21
73
0
26
0
72
0.90
35925--35984
13
4.8
12
80
10
50
0
26
0
73
0.84
35924--36009
12
7.2
13
79
12
96
0
26
0
73
0.84
35902--36004
37
2.8
37
79
15
108
0
25
0
73
0.89
35902--36009
47
2.3
48
84
10
134
0
25
0
73
0.90
35907--36000
12
8.3
11
80
13
86
1
24
0
74
0.88
36533--36649
30
3.9
30
80
7
105
45
3
21
29
1.68
36548--36649
30
3.4
30
86
2
134
45
3
21
29
1.70
36921--37141
54
4.0
54
89
5
320
37
17
15
29
1.91
36921--37123
110
1.8
110
90
3
327
34
18
15
31
1.93
37087--37759
72
9.4
72
91
3
1056
34
19
15
30
1.93
37087--37764
284
2.4
285
92
4
1139
34
19
15
30
1.93

Tables:   1

The End!