Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2456
Parameters: 2 7 7 80 10 50 1000
Length:  31401

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4282--4322
17
2.2
19
83
12
50
21
2
2
73
1.07
8068--8099
4
8.0
4
100
0
64
25
0
0
75
0.81
9880--9937
12
4.7
12
78
14
64
74
5
5
15
1.18
9929--9992
30
2.1
29
83
11
76
75
4
15
4
1.14
11014--11144
6
20.7
6
67
14
59
70
3
19
6
1.25
11026--11144
12
9.6
12
73
13
73
70
4
19
5
1.25
11030--11088
18
3.3
18
80
0
73
71
6
16
5
1.26
11094--11150
14
4.3
13
75
16
55
70
1
19
8
1.23
12973--13019
20
2.3
20
85
0
67
29
36
12
21
1.91
17120--17181
10
5.9
10
74
10
52
33
32
3
30
1.74
17120--17182
21
3.0
21
88
2
90
33
33
3
30
1.74
18125--18187
33
1.9
33
84
12
85
12
26
6
53
1.62
18185--18240
21
2.7
21
72
5
51
8
17
1
71
1.21
18184--18240
14
4.1
14
75
16
57
8
17
1
71
1.19
18247--18340
18
5.4
18
74
7
77
7
18
4
70
1.28
18202--18309
6
17.7
6
69
9
67
6
17
3
72
1.21
18995--19032
10
3.8
10
83
13
51
28
31
18
21
1.97
18994--19031
20
1.9
20
94
0
67
28
34
18
18
1.95
18995--19055
20
3.0
20
83
9
63
29
27
14
27
1.95
19005--19051
10
4.6
10
80
15
51
31
27
14
25
1.95
20344--20392
13
3.7
13
94
2
80
81
0
2
16
0.78
20436--20464
1
29.0
1
100
0
58
100
0
0
0
0.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21451--21499
21
2.2
22
85
7
64
71
2
20
6
1.18
23204--23241
10
3.8
10
83
13
51
28
31
18
21
1.97
23203--23240
20
1.9
20
94
0
67
28
34
18
18
1.95
23204--23264
20
3.0
20
83
9
63
29
27
14
27
1.95
23214--23260
10
4.6
10
80
15
51
31
27
14
25
1.95

Tables:   1

The End!