Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3353
Parameters: 2 7 7 80 10 50 1000
Length:  38271

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
677--1731
1
1055.0
1
96
0
1948
98
0
0
0
0.15
6822--7045
40
5.6
40
88
4
301
25
21
27
25
2.00
13299--13371
27
2.7
28
82
6
96
32
19
20
27
1.97
15826--15864
20
2.0
20
90
10
62
15
23
5
56
1.59
16120--16305
50
3.6
51
78
8
155
26
28
18
25
1.98
19190--19227
18
2.2
18
85
4
51
50
0
13
36
1.42
25487--25635
48
3.1
48
82
3
158
28
21
25
24
1.99
25941--25989
20
2.5
20
83
6
55
63
2
18
16
1.41
29390--29524
27
5.0
27
72
7
103
23
36
17
22
1.95
29406--29526
54
2.2
54
80
0
143
24
34
16
23
1.95
31680--31812
13
9.9
13
68
15
74
40
3
22
33
1.72
31679--31812
40
3.3
40
89
1
187
41
3
22
32
1.72
33257--33480
40
5.7
40
85
6
262
24
27
22
25
2.00
33257--33480
79
2.8
80
82
6
260
24
27
22
25
2.00
33251--33480
118
1.9
120
83
6
299
23
27
22
26
2.00

Tables:   1

The End!