Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3378
Parameters: 2 7 7 80 10 50 1000
Length:  56022

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13015--13050
18
2.0
18
88
0
54
47
19
11
22
1.80
13041--13075
17
2.1
17
94
0
61
31
11
14
42
1.81
32250--32401
75
2.0
75
100
0
304
37
11
11
39
1.78
39313--39497
37
5.0
37
95
0
325
27
20
13
38
1.90
44659--44804
37
4.0
37
92
1
233
25
21
16
36
1.94
44768--45133
46
7.6
46
85
8
453
29
22
13
34
1.93
44768--45119
195
1.8
196
92
0
607
28
22
13
34
1.93
44779--45133
144
2.4
147
94
2
617
29
21
14
34
1.93
44768--45133
98
3.7
97
84
10
501
29
22
13
34
1.93
48243--48437
49
4.0
49
93
0
309
31
29
14
24
1.95
49690--49835
37
4.0
37
93
1
242
24
21
16
36
1.94
49799--50163
46
7.6
46
85
8
451
29
22
13
34
1.93
49810--50163
144
2.4
147
94
1
615
29
22
14
34
1.93
49799--50163
98
3.7
97
83
10
483
29
22
13
34
1.93

Tables:   1

The End!