Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3810
Parameters: 2 7 7 80 10 50 1000
Length:  30066

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3282--3426
40
3.6
40
85
4
193
25
24
26
23
2.00
11005--11078
29
2.6
29
86
4
96
27
16
31
25
1.96
12742--13366
40
15.6
40
90
0
962
24
21
28
25
1.99
16818--17349
47
11.1
47
88
4
758
30
12
30
26
1.92
16818--17349
98
5.5
94
91
3
758
30
12
30
26
1.92
16818--17349
145
3.7
144
90
4
815
30
12
30
26
1.92
17037--17112
24
3.2
24
62
23
61
28
13
32
25
1.93
17159--17233
23
3.2
23
62
23
57
29
10
32
28
1.90
17323--17413
46
2.0
46
82
0
110
32
8
31
26
1.87
17558--17702
37
3.9
37
88
0
218
24
19
30
26
1.98
24044--24503
47
9.8
47
95
0
785
32
8
29
29
1.87
24622--24700
37
2.1
37
90
0
122
24
18
31
25
1.98
25959--26061
43
2.4
43
100
0
206
22
15
35
26
1.94
26043--26115
29
2.5
29
88
4
103
26
16
31
26
1.96
26464--26645
40
4.6
40
89
1
249
24
21
26
26
1.99
26438--26645
80
2.6
79
83
3
249
24
22
26
26
2.00
29960--30066
48
2.3
47
91
6
173
32
7
28
30
1.85

Tables:   1

The End!