Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3093
Parameters: 2 7 7 80 10 50 1000
Length:  28125

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1208--1652
47
9.6
47
89
5
672
33
8
29
28
1.86
1208--1652
93
4.8
94
91
4
672
33
8
29
28
1.86
1208--1652
140
3.2
139
90
5
672
33
8
29
28
1.86
3890--4513
40
16.0
40
89
5
897
24
21
28
25
1.99
4387--4442
28
2.0
28
96
0
103
23
17
26
32
1.97
4302--4513
108
2.0
108
86
0
298
23
20
28
27
1.99
7925--8377
47
9.6
47
90
1
699
33
8
29
29
1.86
7925--8377
96
4.8
94
90
2
708
33
8
29
29
1.86
7925--8377
143
3.2
141
90
2
609
33
8
29
29
1.86
13462--13629
50
3.6
48
81
10
163
25
18
32
23
1.97
13366--13629
46
5.6
50
73
16
190
26
18
31
23
1.97
20875--20899
13
1.9
13
100
0
50
32
16
16
36
1.90
22745--22897
47
3.3
47
91
1
263
33
6
30
29
1.83
24737--24974
40
5.9
40
80
3
273
22
21
28
27
1.99
24779--24977
80
2.5
80
95
0
353
22
21
28
27
1.99
24737--24972
120
2.0
120
86
0
328
22
21
27
27
1.99
24965--25048
43
2.0
43
90
0
132
15
22
29
32
1.95
24970--25065
43
2.2
43
83
0
111
16
20
30
32
1.95
25197--25316
58
2.1
54
86
8
161
25
15
27
32
1.95
25217--25355
58
2.4
59
83
7
160
26
15
28
29
1.96
27473--27497
13
1.9
13
100
0
50
32
16
16
36
1.90

Tables:   1

The End!