Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2746
Parameters: 2 7 7 80 10 50 1000
Length:  55470

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6319--6509
40
4.8
40
80
0
222
26
27
21
24
1.99
6291--6510
80
2.8
79
88
2
309
27
26
20
25
1.99
8563--8641
40
2.0
40
87
0
113
16
13
32
36
1.88
14319--14765
117
3.9
111
77
13
358
27
2
12
57
1.49
14336--14767
110
3.8
116
77
10
334
27
2
13
56
1.51
18573--18797
40
5.6
40
82
5
240
26
23
26
23
2.00
18573--18833
80
3.3
80
82
3
294
26
23
26
24
2.00
18573--18833
120
2.2
120
82
7
309
26
23
26
24
2.00
25622--25846
40
5.6
40
82
6
233
25
23
27
24
2.00
25622--25882
80
3.3
80
82
3
285
25
22
26
24
2.00
25622--25882
120
2.2
120
81
7
300
25
22
26
24
2.00
28033--28059
12
2.2
12
100
0
54
59
0
33
7
1.25
39754--39930
27
6.6
27
84
4
187
28
28
15
28
1.96

Tables:   1

The End!