Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2288
Parameters: 2 7 7 80 10 50 1000
Length:  50624

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156--332
37
4.6
39
77
15
181
23
22
28
24
1.99
234--347
37
3.0
38
81
10
99
25
22
28
22
1.99
9195--9377
79
2.3
80
85
7
239
25
27
22
24
2.00
9193--9377
40
4.7
40
82
7
234
25
28
22
23
2.00
13313--14145
48
17.0
48
86
5
1141
35
6
26
31
1.82
13625--13756
66
2.0
65
98
1
255
36
9
27
27
1.87
13585--13804
114
1.9
114
94
0
386
35
7
26
30
1.84
14190--14334
37
3.9
37
94
0
245
24
19
32
24
1.97
15603--15955
40
8.8
40
92
0
580
25
20
26
26
1.99
19850--20035
41
4.6
41
89
3
252
25
24
25
24
2.00
19852--20005
81
1.9
82
90
4
249
24
24
25
25
2.00
22895--23708
48
17.0
48
90
1
1283
35
6
27
31
1.82
22895--23708
192
4.2
192
94
0
1416
35
6
27
31
1.82
23753--23897
37
3.9
37
93
0
245
23
18
33
24
1.97
33226--33414
55
3.5
53
78
9
179
21
23
17
36
1.95
33226--33428
54
3.7
55
80
7
184
22
23
16
37
1.94
33407--33522
47
2.5
47
94
0
196
26
25
12
35
1.91
34668--34704
9
4.1
9
100
0
74
35
10
32
21
1.88
34898--35050
76
2.0
76
100
0
306
34
23
2
39
1.69
37413--37456
16
2.7
16
82
3
52
50
18
20
11
1.77
37671--37751
29
2.8
29
86
0
117
25
17
32
24
1.97
43200--43350
28
5.4
28
89
1
205
33
27
12
26
1.93

Tables:   1

The End!