Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2731
Parameters: 2 7 7 80 10 50 1000
Length:  54349

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
409--502
36
2.7
35
83
8
111
27
26
19
26
1.99
4479--4682
40
5.1
40
84
5
211
25
25
21
26
2.00
12644--12834
40
4.8
40
88
5
237
25
25
21
27
1.99
12663--12847
79
2.3
80
81
8
243
26
25
22
25
2.00
13410--13469
24
2.7
21
87
10
75
40
16
3
40
1.65
13426--13479
24
2.2
24
100
0
108
40
16
5
37
1.72
18662--18698
18
2.1
18
94
0
65
18
32
27
21
1.97
33732--33810
31
2.5
31
95
0
140
26
25
18
29
1.98
33834--33925
42
2.2
42
90
0
139
34
20
14
30
1.92
34058--34167
26
4.3
26
88
4
147
28
22
20
29
1.98
34058--34167
51
2.2
49
85
8
141
28
22
20
29
1.98
34970--35033
27
2.4
27
84
5
85
20
23
20
35
1.96
35065--35358
27
10.8
27
78
4
214
31
9
18
39
1.83
36559--36730
45
3.7
46
79
11
208
22
20
27
29
1.98
36954--36991
19
2.0
20
85
15
53
36
0
23
39
1.55
43585--43757
46
3.8
48
78
12
184
22
20
27
28
1.99
43980--44017
19
2.0
20
85
15
53
36
0
23
39
1.55
46938--46978
17
2.4
17
100
0
82
36
4
24
34
1.77
49287--49320
17
1.9
17
88
5
50
14
23
38
23
1.92
53208--53529
49
6.7
49
88
9
486
34
7
28
29
1.85
53207--53529
144
2.3
143
91
5
512
34
7
28
29
1.85

Tables:   1

The End!