Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold789
Parameters: 2 7 7 80 10 50 1000
Length:  45932

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2213--2381
40
4.2
40
79
6
175
26
26
21
26
1.99
18520--18545
13
2.0
13
100
0
52
30
0
7
61
1.24
19922--20127
40
5.2
40
92
1
335
23
21
27
28
1.99
22557--22703
49
2.8
51
83
6
172
36
17
25
20
1.94
31293--31516
40
5.7
40
84
5
278
25
21
27
25
2.00
31293--31516
119
1.9
119
83
7
294
25
21
27
25
2.00
31293--31516
79
2.8
80
84
7
296
25
21
27
25
2.00
31346--31549
79
2.6
79
86
5
245
26
20
26
25
1.99
39261--39482
39
5.7
40
83
6
251
25
21
27
25
1.99
39261--39515
79
3.3
79
82
8
281
26
20
27
25
1.99
39261--39488
118
1.9
118
82
7
284
26
21
27
25
1.99
42267--42399
42
3.2
42
69
18
123
27
19
25
27
1.99
42267--42411
43
3.5
42
71
16
129
27
19
26
26
1.99
42265--42464
85
2.4
83
88
1
283
26
20
26
27
1.99
42265--42503
85
2.8
83
84
5
239
27
20
25
27
1.99

Tables:   1

The End!