Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3128
Parameters: 2 7 7 80 10 50 1000
Length:  53316

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1680--1758
37
2.1
37
88
4
115
25
30
18
25
1.98
1876--2314
47
9.4
47
94
1
758
29
30
8
31
1.87
1876--2314
232
1.9
234
93
0
765
29
30
8
31
1.87
5856--6038
40
4.6
40
81
6
203
23
26
23
26
2.00
6346--6424
29
2.7
29
86
5
106
27
32
15
24
1.95
9470--9619
57
2.7
55
86
6
212
31
8
16
44
1.76
12785--12827
17
2.4
17
84
7
50
9
25
46
18
1.79
13410--13576
32
5.2
32
94
0
289
29
19
24
26
1.98
16518--16558
21
2.0
21
85
0
55
21
17
39
21
1.93
17387--17413
6
4.5
6
100
0
54
85
0
0
14
0.61
19990--20042
27
2.0
27
82
14
65
54
13
11
20
1.69
20897--20922
6
4.3
6
100
0
52
84
0
0
15
0.62
26374--26421
24
2.0
24
100
0
96
25
25
20
29
1.99
27623--27648
13
2.0
13
100
0
52
15
30
38
15
1.88
36280--36323
18
2.3
19
84
7
54
31
6
9
52
1.59
36813--36851
19
2.1
19
85
0
51
71
7
5
15
1.26
37277--37381
55
1.9
55
82
5
131
35
18
24
21
1.96
37310--37391
28
3.0
27
85
3
101
31
20
25
21
1.98
37497--37561
28
2.3
28
84
5
87
35
7
24
32
1.84
38610--38642
12
2.6
13
85
9
50
45
0
45
9
1.35
46326--46549
104
2.2
104
93
1
378
17
19
31
31
1.95
46468--46619
71
2.1
72
92
1
252
23
17
29
30
1.97

Tables:   1

The End!