Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3288
Parameters: 2 7 7 80 10 50 1000
Length:  41054

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1395--1485
27
3.4
26
81
3
101
37
14
20
27
1.92
2901--3076
46
3.8
46
75
10
160
21
20
29
28
1.98
2897--3069
93
1.9
93
90
0
274
21
20
30
27
1.98
4178--4267
27
3.4
26
82
8
101
22
22
20
35
1.96
4421--4481
28
2.2
28
82
5
70
24
22
26
26
2.00
7124--7157
18
1.9
18
88
5
52
17
29
41
11
1.85
10068--10490
54
7.9
54
85
2
501
36
16
24
22
1.94
10224--10311
26
3.2
29
61
23
71
37
19
26
17
1.93
14962--15172
40
5.3
40
88
4
230
23
21
27
28
1.99
18254--18426
46
3.7
46
78
10
190
30
27
20
21
1.98
27505--27599
42
2.2
43
87
5
131
33
24
15
26
1.95
32371--32500
47
2.7
48
90
3
201
32
28
17
21
1.96
32378--32500
48
2.6
47
92
3
194
31
29
17
21
1.96
36627--38125
509
3.0
501
86
5
1882
30
16
22
30
1.96

Tables:   1

The End!