Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold373
Parameters: 2 7 7 80 10 50 1000
Length:  105144

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
473--500
14
2.0
14
100
0
56
28
14
7
50
1.69
3492--3542
16
3.2
16
97
0
93
21
11
13
52
1.72
4512--4550
11
3.4
12
82
13
55
69
0
10
20
1.17
6160--6305
8
18.9
8
72
16
103
61
0
2
35
1.10
6225--6278
23
2.4
23
84
6
67
61
0
3
35
1.14
6158--6297
21
6.2
22
73
16
92
62
0
2
35
1.08
6685--6712
13
2.2
13
100
0
56
46
0
7
46
1.30
6866--6923
8
7.1
8
75
9
55
37
1
0
60
1.07
6870--6916
19
2.5
19
86
6
69
38
2
0
59
1.09
6894--6923
9
3.4
9
95
4
53
43
0
0
56
0.99
6986--7024
17
2.3
17
86
8
53
23
2
5
69
1.21
7085--7144
31
1.9
31
100
0
120
43
0
8
48
1.33
7191--7222
15
2.0
17
88
11
50
31
3
9
56
1.47
7315--7371
27
2.1
28
90
3
89
43
7
7
42
1.58
7847--7889
18
2.4
18
88
0
59
69
6
13
9
1.35
11658--11707
20
2.6
19
90
9
75
42
22
0
36
1.54
11705--11732
14
2.0
14
100
0
56
71
0
14
14
1.15
13203--13254
27
2.0
26
84
3
68
28
23
17
30
1.97
13943--14002
27
2.3
26
82
2
66
21
21
20
36
1.95
15379--15418
20
2.0
21
85
5
55
20
7
5
67
1.34
19523--19583
30
2.0
30
83
0
77
31
22
8
37
1.84
21559--21697
71
2.0
71
97
0
260
23
25
15
35
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23887--23948
30
2.1
30
84
0
79
32
24
6
37
1.81
24971--24995
13
1.9
13
100
0
50
56
8
16
20
1.65
44338--44560
104
2.2
103
92
2
367
17
18
31
31
1.95
44480--44628
69
2.1
70
91
2
237
23
16
29
30
1.96
44588--44640
26
2.0
26
92
0
88
16
20
33
28
1.95
52063--52114
27
1.9
27
96
0
95
13
25
32
28
1.93
51883--52148
104
2.6
105
91
3
432
18
21
30
30
1.97
53391--53460
20
3.3
20
66
14
59
48
18
2
30
1.62
53392--53464
22
3.2
24
63
21
66
49
20
2
27
1.63
53392--53478
44
2.0
44
100
0
174
47
20
2
29
1.63
54042--54133
33
2.8
33
80
8
116
32
23
10
32
1.90
54044--54157
33
3.5
33
79
11
110
33
23
11
31
1.90
58924--59014
25
3.6
25
78
8
96
28
21
26
23
1.99
64901--65133
48
4.9
48
85
2
279
29
15
26
28
1.96
71862--72124
48
5.5
48
74
5
217
29
17
25
27
1.97
71844--72124
96
2.9
96
88
0
400
29
17
25
27
1.97
74274--74508
40
5.9
40
92
0
373
25
22
27
24
2.00
79329--79449
28
4.3
28
94
2
208
33
26
13
27
1.93
79329--79474
56
2.6
56
90
3
213
33
26
13
26
1.93
84750--84937
40
4.7
40
89
0
288
26
21
28
23
1.99
93774--93942
46
3.7
45
73
16
159
23
18
27
30
1.98
96486--96536
26
2.0
26
96
0
93
11
23
35
29
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96409--96671
103
2.6
103
89
4
392
18
19
30
31
1.96

Tables:   1

The End!