Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold245
Parameters: 2 7 7 80 10 50 1000
Length:  54302

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--3354
42
79.5
43
80
9
3142
16
33
32
17
1.93
595--3354
85
32.8
86
81
7
2776
16
33
32
17
1.93
2437--3415
43
23.0
43
80
9
316
15
31
34
18
1.92
15853--15909
24
2.4
24
72
0
60
10
36
33
19
1.86
16184--16979
43
18.7
43
82
5
830
16
32
32
18
1.93
16184--16885
213
3.3
213
83
4
878
15
33
32
17
1.92
21644--21715
35
2.1
35
89
0
108
37
11
25
26
1.89
24997--28841
43
91.3
43
80
7
3617
16
32
33
17
1.92
25001--28771
126
29.8
127
79
8
3470
16
32
33
17
1.92
25001--28726
715
5.2
707
84
6
3529
16
33
33
17
1.92
27899--28841
85
11.1
85
86
4
1138
15
32
33
17
1.92
35039--35110
35
2.1
35
89
0
108
37
11
25
26
1.89
35422--35517
48
2.0
50
85
8
135
27
14
27
31
1.95
38889--39009
58
2.1
59
90
1
190
33
23
18
23
1.96
39763--40513
43
17.7
43
82
6
811
15
33
33
17
1.92
39763--40513
85
8.8
85
83
7
823
15
33
33
17
1.92
39715--40572
43
20.2
43
76
11
197
15
32
33
18
1.92
52684--53435
43
17.8
43
80
7
785
16
32
34
16
1.91
52738--53435
85
8.2
85
83
8
705
16
32
33
16
1.92
53901--53972
36
2.0
36
97
0
135
18
19
19
43
1.89

Tables:   1

The End!