Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold252
Parameters: 2 7 7 80 10 50 1000
Length:  53882

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4450--4704
39
6.6
40
82
8
251
25
28
20
24
1.99
12289--12550
40
6.6
40
86
4
300
27
28
20
24
1.99
12289--12550
119
2.2
119
82
5
316
27
28
20
24
1.99
12289--12550
79
3.3
79
85
4
316
27
28
20
24
1.99
15764--15903
27
5.2
27
84
0
145
37
21
20
20
1.95
15894--15987
27
3.5
27
80
2
109
31
13
18
36
1.90
17756--17941
41
4.6
41
89
0
250
23
25
24
26
2.00
17756--17941
81
2.3
81
85
5
243
23
25
24
26
2.00
30584--30636
26
2.0
26
100
0
106
45
3
7
43
1.50
36234--36291
30
2.0
30
82
3
73
27
13
27
31
1.94
36691--36861
46
3.7
44
74
14
139
28
18
29
23
1.98
36724--36859
47
3.0
44
78
11
130
29
19
27
23
1.98
37942--37982
22
1.9
22
90
5
66
12
41
26
19
1.87
39821--39993
46
3.8
46
78
11
192
21
18
30
30
1.97
42905--42960
15
3.7
15
88
7
87
12
16
10
60
1.58
45350--45525
46
3.8
45
77
10
185
21
19
29
30
1.97
45346--45517
93
1.8
93
91
0
281
20
19
30
29
1.97
46784--47012
40
5.8
40
86
3
286
23
22
28
25
1.99

Tables:   1

The End!