Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1633
Parameters: 2 7 7 80 10 50 1000
Length:  34027

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4438--4610
93
1.9
93
91
0
283
27
30
21
20
1.98
4431--4606
46
3.8
46
76
7
185
28
29
21
20
1.98
7121--7166
20
2.3
20
81
3
58
28
19
26
26
1.99
12854--12886
18
1.9
17
88
11
50
42
12
15
30
1.83
16592--16640
13
4.0
13
79
12
59
22
4
6
67
1.30
16591--16636
12
3.6
13
80
11
51
17
4
4
73
1.15
23012--23090
37
2.1
37
88
4
115
25
30
18
25
1.98
23209--23400
47
4.1
47
89
0
285
27
31
9
31
1.89
26798--26952
77
2.0
80
83
6
201
25
26
21
27
1.99
26812--26986
78
2.2
79
80
9
189
24
26
22
26
2.00
26811--26990
40
4.6
40
79
9
167
24
26
22
26
2.00
27296--27374
29
2.7
29
84
5
97
29
32
13
24
1.94
27356--27458
43
2.4
43
98
0
197
27
35
14
22
1.93
27356--27471
43
2.7
43
90
2
144
30
35
13
20
1.92
29288--29366
37
2.1
37
88
4
115
25
30
18
25
1.98
29485--29931
45
10.0
47
86
10
643
27
30
9
31
1.89
29485--29931
92
5.0
92
89
7
656
27
30
9
31
1.89
29536--29931
181
2.2
176
92
6
653
29
29
9
32
1.88

Tables:   1

The End!