Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3599
Parameters: 2 7 7 80 10 50 1000
Length:  53516

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5372--5572
40
5.1
40
84
6
259
24
28
24
22
2.00
5372--5576
78
2.6
77
86
5
268
24
27
23
23
2.00
9990--10015
13
2.0
13
100
0
52
53
15
0
30
1.42
13142--13214
35
2.1
35
92
0
119
24
5
35
34
1.79
15166--15208
22
2.0
22
90
4
70
9
25
32
32
1.88
21135--21253
57
2.1
57
98
0
229
51
10
7
30
1.65
33333--33506
37
4.7
37
89
2
260
25
32
17
24
1.97
33664--33845
48
3.8
48
85
7
260
31
25
7
36
1.83
33661--33844
98
1.9
97
91
6
302
30
25
7
36
1.83
33815--34008
47
4.1
47
89
1
282
26
29
10
33
1.90
33908--33979
22
3.1
22
64
24
58
23
29
13
33
1.93
37344--37695
40
8.8
40
94
0
596
25
27
21
25
2.00
38991--39108
47
2.3
52
83
14
147
32
13
29
24
1.93
41168--41500
39
8.4
37
73
20
232
24
21
27
26
1.99
41168--41507
79
4.2
79
77
16
319
24
21
27
26
1.99
44890--45006
50
2.4
49
83
9
143
35
12
28
23
1.91
45033--45216
51
3.7
48
76
15
187
36
6
25
30
1.81

Tables:   1

The End!