Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1505
Parameters: 2 7 7 80 10 50 1000
Length:  76804

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6862--6937
40
2.0
38
87
7
109
38
22
1
38
1.63
9117--9290
45
3.8
44
80
9
206
21
20
29
28
1.98
12169--12223
15
3.7
15
85
9
78
12
14
10
61
1.56
14613--14788
46
3.8
46
78
11
198
21
19
28
30
1.97
14610--14780
93
1.8
93
92
2
290
21
19
29
29
1.98
18647--18688
17
2.5
17
100
0
84
30
11
19
38
1.88
19718--19756
21
1.9
20
94
5
69
46
25
0
28
1.53
27458--27772
158
2.0
158
98
0
612
19
27
25
28
1.98
33473--33568
34
2.9
33
80
10
106
25
20
25
29
1.99
37636--37731
34
2.9
33
80
10
106
25
20
25
29
1.99
40734--40951
40
5.5
40
90
2
298
23
23
28
24
2.00
48899--49115
40
5.5
40
89
3
298
23
23
28
24
1.99
48899--49115
79
2.7
80
87
4
298
23
23
28
24
1.99
48899--49115
119
1.8
119
84
5
296
23
23
28
24
1.99
57459--57568
43
2.6
43
84
5
134
25
19
23
31
1.98
59118--59382
40
6.7
40
84
5
304
24
20
27
26
1.99
59119--59415
80
3.7
80
83
4
228
25
20
27
25
1.99
66758--66971
40
5.4
39
88
3
261
25
19
28
26
1.99
66711--66973
79
3.3
77
85
4
303
25
20
28
26
1.99
66712--67006
79
3.7
79
83
4
222
26
20
28
25
1.99
69871--69932
20
3.2
19
82
11
72
35
12
22
29
1.91
69976--70094
25
4.8
26
84
13
137
27
21
22
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72133--73969
1
1837.0
1
78
0
1550
4
5
2
87
0.75
72105--72195
35
2.6
33
79
8
83
4
7
1
86
0.73
72132--73969
867
2.1
856
83
10
2240
4
5
2
87
0.75

Tables:   1

The End!