Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1718
Parameters: 2 7 7 80 10 50 1000
Length:  53951

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1430--1469
1
40.0
1
94
0
62
0
5
0
95
0.29
5711--5865
46
3.4
46
77
13
183
29
28
21
21
1.98
6254--6313
30
2.0
30
90
0
93
30
25
8
36
1.85
13220--13390
46
3.7
45
79
12
204
28
27
21
22
1.99
13225--13394
92
1.8
93
94
1
306
28
28
21
21
1.99
13808--13867
30
2.0
30
90
0
93
30
25
8
36
1.85
17139--17253
46
2.5
46
80
1
124
19
17
13
50
1.78
17288--17389
45
2.3
46
88
6
147
23
20
18
37
1.94
17390--17483
46
2.0
47
87
6
138
19
13
18
48
1.80
19156--19248
40
2.3
42
85
7
120
31
16
21
31
1.95
19237--19330
41
2.3
41
96
0
170
23
15
29
30
1.96
19176--19355
41
4.4
40
80
7
139
29
16
23
30
1.96
29166--29335
49
3.5
48
77
7
157
25
27
20
26
1.99
29398--29506
46
2.4
46
77
10
125
23
27
19
29
1.98
36981--37245
104
2.5
104
91
1
424
18
19
30
30
1.96
44421--44472
27
1.9
27
96
0
95
13
25
32
28
1.93
44345--44609
103
2.6
103
90
3
417
18
19
30
30
1.96
44526--44577
26
2.0
26
92
0
86
15
21
34
28
1.94
51546--51807
102
2.6
102
84
11
340
19
20
30
29
1.97
51725--51774
25
2.0
25
92
0
82
12
22
36
30
1.90

Tables:   1

The End!